Week 
Topic 
Material 
1 
Introduction and motivation 
Class Survey
PPT Slides
PDF Slides
R script 1

2 
Visualizing data 
PPT Slides
PDF Slides
WS Chapter 2
plotting script
Data file for homework 2

3 
Summaries and uncertainty 
PPT Slides
PDF Slides
WS Chapter 1 and 34

4 
Probability and Discrete variables 
PPT Slides
PDF Slides
WS Chapters 57
Homework

5 
2 Continuous variables 
PPT Slides
PDF Slides
script from lecture

6 
1 Continuous and 1 Discrete variable 
PPT Slides
PDF Slides
orthoptera.csv

7 
Plotting / review / midterm

midterm reveiw Files for midterm:
vac.rates.csv
mite.count.csv
chicks.csv

8 
ggplot2 / GLM1 
review midterm
fundamentals of linear models
PPT Slides
PDF Slides
gnatocerus.csv
betta_splendens.csv
google folder

9 
GLM2 
PPT Slides
PDF Slides
stickleback.csv
chrysina.csv

10 
GWAS 
PPT Slides
PDF Slides

13 
MCMC and Monte Carlo Methods 
chiro.csv
carn.csv
MCMC pdf
MCMC PDF walks you through what
we did in class and
is also an example of the kind
of thing you can make with Rmarkdown
MCMC PPT Slides
MCMC PDF Slides
retrogenes.csv
MC PPT Slides
MC PDF Slides

13 
MCMC and Monte Carlo 
GLM homework
Monte Carlo homework
genome.data.csv
highdnds.csv

14 
Data Wrangling and Practice 
coleo.mcmc.log
catwalk.data.csv

15 
Review and Shiny 
review sheet
gnatocerus.male.csv
newt.repro.csv
hiC.data.csv

16 
Final 
sword.csv
test.log.csv
